- rewrite RAG architecture doc for py-rag service contract mapping, ingest and rebuild ops
- refresh observability/trace doc for post-L0 single-attempt semantics
- add py-rag chain exploration note; mark superseded Milvus/L0 notes with status banners
- close ISS-017 (superseded by L0 sinking); mark knowledge_domain table orphaned
- refresh architecture/mvp/engineering indexes
Relocate RAG and diagnosis decision/E2E writeups from docs/ root into
mvp/engineering so architecture, issues, and engineering narrative stay
together. Update indexes and cross-links; leave docs/learning as legacy.
Persist provider reasoning and assistant text separately on agent_reasoning_audit
(DeepSeekAssistantMessage path), extract diagnosis_run.conclusion, enrich RAG
tool audit (step_id/query/qualityScore), gate empty mysql tools, drop devtools,
and align MVP docs after live E2E verification.
Add current RAG architecture covering MilvusClientV2 hybrid search,
chunk evidence identity, rebuild ops, and update the MVP architecture
index and system overview links.